Pseudomonas aeruginosa LESB58, PALES_34131 (femR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas aeruginosa LESB58
GCF_000026645.1|latest
Locus Tag
PALES_34131
Name
femR
Replicon chromosome
Genomic location 3783008 - 3783958 (+ strand)

Cross-References

RefSeq YP_002440999
GI 218892132
Entrez 7177716

Product

Feature Type CDS
Coding Frame 1
Product Name
sigma factor regulator, FemR
Product Name Confidence: Class 1
Synonyms
Evidence for Translation
Charge (pH 7) 8.09
Kyte-Doolittle Hydrophobicity Value -0.244
Molecular Weight (kDa) 35.0
Isoelectric Point (pI) 9.99

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 120 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000462 (1708 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PALES_34131
Search term: femR

Human Homologs

References

Characterization of five novel Pseudomonas aeruginosa cell-surface signalling systems.
Llamas MA, Mooij MJ, Sparrius M, Vandenbroucke-Grauls CM, Ratledge C, Bitter W
Mol Microbiol 2008 Jan;67(2):458-72
PubMed ID: 18086184