Pseudomonas aeruginosa LESB58, PALES_46541 (vreI)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa LESB58
GCF_000026645.1|latest |
| Locus Tag |
PALES_46541
|
| Name |
vreI
|
| Replicon | chromosome |
| Genomic location | 5120128 - 5120673 (- strand) |
Cross-References
| RefSeq | YP_002442235 |
| GI | 218893366 |
| Entrez | 7178634 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
ECF sigma factor, VreI
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 1.63 |
| Kyte-Doolittle Hydrophobicity Value | -0.373 |
| Molecular Weight (kDa) | 20.6 |
| Isoelectric Point (pI) | 8.07 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 113 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000654 (367 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PALES_46541
Search term: vreI
Search term: ECF sigma factor, VreI
|
Human Homologs
References
|
A Novel extracytoplasmic function (ECF) sigma factor regulates virulence in Pseudomonas aeruginosa.
Llamas MA, van der Sar A, Chu BC, Sparrius M, Vogel HJ, Bitter W
PLoS Pathog 2009 Sep;5(9):e1000572
PubMed ID: 19730690
|