Motif View

Internal ID 17655610
Source Database TransTermHP TERM 14
Feature Type terminator
Name
Rho-independent transcription terminator TERM 14
Sequence CTCGAAACCCCCGCCTCGGCGGGGGTTTCGCG
Look for more occurrences
Start 22738
End 22769
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GTGCAGAATCCCTGA(5' tail) CTCGAAACCCCCGC(5' stem) CTCG(loop) GCGGGGGTTTCGCG(3' stem) TTTCTGGGGGAAGGA(3' tail). Confidence: 100. opp_overlap 22732 22745

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685