Motif View

Internal ID 17655614
Source Database TransTermHP TERM 24
Feature Type terminator
Name
Rho-independent transcription terminator TERM 24
Sequence GTGAGCCAGGCCGGCACCGCTGCGGTGCCGCGCCTGGACCAG
Look for more occurrences
Start 107398
End 107439
Strand +
Genomic Context Located within gene tssG1
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TCGACCCTGGCCTCG(5' tail) GTGAGCCAGGC-CGGCACCG(5' stem) CTG(loop) CGGTGCCGCGCCTGGACCAG(3' stem) TTCTTCTTCGGCCTC(3' tail). Confidence: 91. gap 1, overlap 107399

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685