Motif View

Internal ID 17656610
Source Database TransTermHP TERM 41
Feature Type terminator
Name
Rho-independent transcription terminator TERM 41
Sequence CCCCGGCCCAGGCCGGGG
Look for more occurrences
Start 223798
End 223815
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CTGAGTCCACCAGAA(5' tail) CCCCGGC(5' stem) CCAG(loop) GCCGGGG(3' stem) TTTTTCGTTTTCGCG(3' tail). Confidence: 100. opp_overlap 223798

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685