View alternate annotations in GBrowse or JBrowse

IMP: This is a list of Pseudomonas genomes that are available for viewing with the JBrowse Genome Browser. The list is currently limited to select complete genomes.

The JBrowse viewer allows you to view multiple annotations from alternate resources as well as view and upload your own annotations including gene predictions and next-generation sequencing data. Please view the help doc on the browser page for more information.

We originally used the GBrowse viewer on this site but is no longer being actively developed by GMOD. We currently still host links to GBrowse views for genomes that were already loaded into GBrowse but we plan to phase them out in the near future. JBrowse has a superior interface for viewing gene annotations/NGS data and has a low performance overhead on our servers.

11 strains returned

= Popular strains, shown first by default
Strain Assembly Level Number of Genes Replicon
Pseudomonas stutzeri A1501 Complete Genome 4209
chromosome JBrowse GBrowse
Pseudomonas putida F1 Complete Genome 5402
chromosome JBrowse GBrowse
Pseudomonas savastanoi pv. phaseolicola 1448A Complete Genome 5437
chromosome JBrowse GBrowse
large plasmid JBrowse GBrowse
small plasmid JBrowse GBrowse
Pseudomonas aeruginosa PAK - Assembly GCF_000568855.2 Complete Genome 5564
chromosome JBrowse
Pseudomonas aeruginosa PAO1 (Reference) Complete Genome 5688
chromosome JBrowse GBrowse
Pseudomonas putida KT2440 (TIGR) Complete Genome 5729
chromosome JBrowse
Pseudomonas syringae pv. tomato DC3000 Complete Genome 5842
chromosome JBrowse GBrowse
plasmid pDC3000A JBrowse GBrowse
plasmid pDC3000B JBrowse GBrowse
Pseudomonas aeruginosa UCBPP-PA14 Complete Genome 5977
chromosome JBrowse GBrowse
Pseudomonas fluorescens SBW25 Complete Genome 6106
chromosome JBrowse GBrowse
Pseudomonas protegens Pf-5 Complete Genome 6273
chromosome JBrowse GBrowse
Pseudomonas aeruginosa PA7 Complete Genome 6369
chromosome JBrowse GBrowse