View alternate annotations in GBrowse or JBrowse

IMP: This is a list of Pseudomonas genomes that are available for viewing with the JBrowse Genome Browser. The list is currently limited to complete genomes, however we may adjust the criteria in the near future to include higher quality draft genomes.

The JBrowse viewer allows you to view multiple annotations from alternate resources as well as view and upload your own annotations including gene predictions and next-generation sequencing data. Please view the help doc on the browser page for more information.

We originally used the GBrowse viewer on this site but is no longer being actively developed by GMOD. We currently still host links to GBrowse views for genomes that were already loaded into GBrowse but we plan to phase them out in the near future. JBrowse has a superior interface for viewing gene annotations/NGS data and has a low performance overhead on our servers.

215 strains returned

= Reference strain, shown first by default
Strain Assembly Level Number of Genes Replicon
Pseudomonas sp. 20_BN Complete Genome 3423
chromosome JBrowse
Pseudomonas sp. S-6-2 Complete Genome 3712
chromosome JBrowse
Pseudomonas stutzeri DSM 10701 Complete Genome 3888
chromosome JBrowse GBrowse
Pseudomonas monteilii USDA-ARS-USMARC-56711 Complete Genome 3937
chromosome JBrowse
Pseudomonas alcaligenes NEB 585 Complete Genome 4049
chromosome JBrowse
Pseudomonas balearica DSM6083 (=SP1402) Complete Genome 4061
chromosome JBrowse
Pseudomonas parafulva PRS09-11288 Complete Genome 4158
chromosome JBrowse
Pseudomonas rhizosphaerae DSM 16299 Complete Genome 4174
chromosome JBrowse
Pseudomonas stutzeri A1501 Complete Genome 4209
chromosome JBrowse GBrowse
Pseudomonas pseudoalcaligenes assembly GCF_000953455.1 Complete Genome 4215
chromosome JBrowse
Pseudomonas sp. URMO17WK12:I11 isolate Yellow Complete Genome 4268
chromosome JBrowse
Pseudomonas stutzeri SLG510A3-8 Complete Genome 4282
chromosome JBrowse
Pseudomonas stutzeri 28a24 Complete Genome 4291
chromosome JBrowse
Pseudomonas cremoricolorata ND07 Complete Genome 4305
chromosome JBrowse
Pseudomonas stutzeri ATCC 17588 = LMG 11199 Complete Genome 4314
chromosome JBrowse GBrowse
Pseudomonas sp. CC6-YY-74 Complete Genome 4344
chromosome JBrowse
Pseudomonas oryzihabitans USDA-ARS-USMARC-56511 Complete Genome 4367
chromosome JBrowse
Pseudomonas stutzeri DSM 4166 Complete Genome 4373
chromosome JBrowse GBrowse
Pseudomonas stutzeri CCUG 29243 Complete Genome 4374
chromosome JBrowse GBrowse
Pseudomonas stutzeri RCH2 Complete Genome 4404
chromosome JBrowse GBrowse
plasmid pPSEST01 JBrowse GBrowse
plasmid pPSEST02 JBrowse GBrowse
plasmid pPSEST03 JBrowse GBrowse