View alternate annotations in GBrowse or JBrowse

IMP: This is a list of Pseudomonas genomes that are available for viewing with the JBrowse Genome Browser. The list is currently limited to complete genomes, however we may adjust the criteria in the near future to include higher quality draft genomes.

The JBrowse viewer allows you to view multiple annotations from alternate resources as well as view and upload your own annotations including gene predictions and next-generation sequencing data. Please view the help doc on the browser page for more information.

We originally used the GBrowse viewer on this site but is no longer being actively developed by GMOD. We currently still host links to GBrowse views for genomes that were already loaded into GBrowse but we plan to phase them out in the near future. JBrowse has a superior interface for viewing gene annotations/NGS data and has a low performance overhead on our servers.

215 strains returned

= Reference strain, shown first by default
Strain Assembly Level Number of Genes Replicon
Pseudomonas brassicacearum L13-6-12 Complete Genome 5867
chromosome JBrowse
Pseudomonas brassicacearum LBUM300 Complete Genome 6083
chromosome JBrowse
Pseudomonas cerasi isolate Sour cherry (Prunus cerasus) symptoma Complete Genome 5467
chromosome: 1. JBrowse
plasmid: p58T1. JBrowse
plasmid: p58T2. JBrowse
plasmid: p58T3. JBrowse
plasmid: p58T4. JBrowse
plasmid: p58T5. JBrowse
plasmid: p58T6. JBrowse
Pseudomonas chlororaphis isolate 189 Complete Genome 5850
chromosome JBrowse
Pseudomonas chlororaphis PCL1606 Complete Genome 5955
chromosome JBrowse
plasmid JBrowse
Pseudomonas chlororaphis subsp. aurantiaca JD37 Complete Genome 5994
chromosome JBrowse
Pseudomonas chlororaphis UFB2 isolate Soil Complete Genome 5556
chromosome JBrowse
Pseudomonas cichorii JBC1 Complete Genome 5146
chromosome JBrowse
Pseudomonas citronellolis P3B5 Complete Genome 6021
chromosome JBrowse
Pseudomonas citronellolis SJTE-3 Complete Genome 6684
plasmid pRBL16 JBrowse
strain SJTE-3 JBrowse
Pseudomonas corrugata RM1-1-4 Complete Genome 5282
chromosome JBrowse
Pseudomonas cremoricolorata ND07 Complete Genome 4305
chromosome JBrowse
Pseudomonas denitrificans ATCC 13867 Complete Genome 5135
chromosome JBrowse GBrowse
Pseudomonas entomophila L48 Complete Genome 5275
chromosome JBrowse GBrowse
Pseudomonas fluorescens A506 Complete Genome 5495
chromosome JBrowse GBrowse
plasmid pA506 JBrowse GBrowse
Pseudomonas fluorescens F113 Complete Genome 5962
chromosome JBrowse GBrowse
Pseudomonas fluorescens FW300-N2C3 Complete Genome 6068
chromosome JBrowse
Pseudomonas fluorescens FW300-N2E3 Complete Genome 5823
chromosome JBrowse
Pseudomonas fluorescens L111 Complete Genome 5845
chromosome JBrowse
Pseudomonas fluorescens L228 Complete Genome 5619
plasmid JBrowse
strain L228 JBrowse