View alternate annotations in GBrowse or JBrowse

IMP: This is a list of Pseudomonas genomes that are available for viewing with the JBrowse Genome Browser. The list is currently limited to complete genomes, however we may adjust the criteria in the near future to include higher quality draft genomes.

The JBrowse viewer allows you to view multiple annotations from alternate resources as well as view and upload your own annotations including gene predictions and next-generation sequencing data. Please view the help doc on the browser page for more information.

We originally used the GBrowse viewer on this site but is no longer being actively developed by GMOD. We currently still host links to GBrowse views for genomes that were already loaded into GBrowse but we plan to phase them out in the near future. JBrowse has a superior interface for viewing gene annotations/NGS data and has a low performance overhead on our servers.

184 strains returned

= Reference strain, shown first by default
Strain Assembly Level Number of Genes Replicon
Pseudomonas putida NBRC 14164 - Assembly GCF_000412675.1 Gapless Chromosome 5544
chromosome JBrowse GBrowse
Pseudomonas putida ND6 Complete Genome 6382
chromosome JBrowse GBrowse
plasmid pND6-2 JBrowse GBrowse
Pseudomonas putida PC2 Complete Genome 5159
chromosome JBrowse
Pseudomonas putida S12 - Assembly GCF_000495455.2 Complete Genome 5806
chromosome JBrowse
plasmid pTTS12 JBrowse
Pseudomonas putida S13.1.2 Complete Genome 5871
chromosome JBrowse
Pseudomonas putida S16 Complete Genome 5369
chromosome JBrowse GBrowse
Pseudomonas putida W619 Complete Genome 5309
chromosome JBrowse GBrowse
Pseudomonas resinovorans NBRC 106553 Gapless Chromosome 5816
NBRC 106553 DNA, complete geonome JBrowse
plasmid pCAR1.3 JBrowse
Pseudomonas rhizosphaerae DSM 16299 Complete Genome 4174
chromosome JBrowse
Pseudomonas sp. 20_BN Complete Genome 3423
chromosome JBrowse
Pseudomonas sp. A3(2016) Complete Genome 5983
chromosome JBrowse
Pseudomonas sp. CCOS 191 Complete Genome 5351
chromosome JBrowse
Pseudomonas sp. DR 5-09 DR 5-09 Complete Genome 5763
chromosome JBrowse
Pseudomonas sp. FGI182 Complete Genome 5193
chromosome JBrowse
Pseudomonas sp. GR 6-02 GR 6-02 Complete Genome 5760
chromosome JBrowse
Pseudomonas sp. JY-Q JY-Q Complete Genome 5462
chromosome JBrowse
Pseudomonas sp. MRSN12121 Complete Genome 6394
MRSN12121 JBrowse
plasmid JBrowse
plasmid pMRVIM0812 JBrowse
Pseudomonas sp. MS586 MS586 Complete Genome 5548
chromosome JBrowse
Pseudomonas sp. Os17 Os17 Complete Genome 6079
chromosome JBrowse
Pseudomonas sp. St29 St29 Complete Genome 6079
chromosome JBrowse