View alternate annotations in GBrowse or JBrowse

IMP: This is a list of Pseudomonas genomes that are available for viewing with the JBrowse Genome Browser. The list is currently limited to complete genomes, however we may adjust the criteria in the near future to include higher quality draft genomes.

The JBrowse viewer allows you to view multiple annotations from alternate resources as well as view and upload your own annotations including gene predictions and next-generation sequencing data. Please view the help doc on the browser page for more information.

We originally used the GBrowse viewer on this site but is no longer being actively developed by GMOD. We currently still host links to GBrowse views for genomes that were already loaded into GBrowse but we plan to phase them out in the near future. JBrowse has a superior interface for viewing gene annotations/NGS data and has a low performance overhead on our servers.

215 strains returned

= Reference strain, shown first by default
Strain Assembly Level Number of Genes Replicon
Pseudomonas monteilii SB3101 Complete Genome 5491
chromosome JBrowse
Pseudomonas monteilii USDA-ARS-USMARC-56711 Complete Genome 3937
chromosome JBrowse
Pseudomonas mosselii SJ10 Complete Genome 5704
chromosome JBrowse
Pseudomonas oryzihabitans USDA-ARS-USMARC-56511 Complete Genome 4367
chromosome JBrowse
Pseudomonas parafulva CRS01-1 Complete Genome 4429
chromosome JBrowse
Pseudomonas parafulva PRS09-11288 Complete Genome 4158
chromosome JBrowse
Pseudomonas plecoglossicida NyZ12 Complete Genome 5688
chromosome JBrowse
Pseudomonas poae RE*1-1-14 Complete Genome 4877
chromosome JBrowse GBrowse
Pseudomonas protegens CHA0 Complete Genome 6199
chromosome JBrowse GBrowse
Pseudomonas protegens H78 Complete Genome 6368
chromosome JBrowse
Pseudomonas pseudoalcaligenes assembly GCF_000953455.1 Complete Genome 4215
chromosome JBrowse
Pseudomonas psychrophila L10.10 Complete Genome 4541
chromosome JBrowse
Pseudomonas psychrotolerans PRS08-11306 Complete Genome 4877
chromosome JBrowse
plasmid pPRS08-11306 JBrowse
Pseudomonas putida 1A00316 Complete Genome 5016
chromosome JBrowse
Pseudomonas putida AA7 Complete Genome 5439
chromosome JBrowse
Pseudomonas putida BIRD-1 Complete Genome 5046
chromosome JBrowse GBrowse
Pseudomonas putida DLL-E4 Complete Genome 5964
chromosome JBrowse
Pseudomonas putida GB-1 Complete Genome 5529
chromosome JBrowse GBrowse
Pseudomonas putida H8234 Complete Genome 6482
chromosome JBrowse GBrowse
Pseudomonas putida HB3267 Complete Genome 5478
chromosome JBrowse GBrowse
plasmid pPC9 JBrowse GBrowse