View alternate annotations in GBrowse or JBrowse

IMP: This is a list of Pseudomonas genomes that are available for viewing with the JBrowse Genome Browser. The list is currently limited to complete genomes, however we may adjust the criteria in the near future to include higher quality draft genomes.

The JBrowse viewer allows you to view multiple annotations from alternate resources as well as view and upload your own annotations including gene predictions and next-generation sequencing data. Please view the help doc on the browser page for more information.

We originally used the GBrowse viewer on this site but is no longer being actively developed by GMOD. We currently still host links to GBrowse views for genomes that were already loaded into GBrowse but we plan to phase them out in the near future. JBrowse has a superior interface for viewing gene annotations/NGS data and has a low performance overhead on our servers.

335 strains returned

= Popular strains, shown first by default
Strain Assembly Level Number of Genes Replicon
Pseudomonas aeruginosa WCHPA075019 Complete Genome 6382
chromosome JBrowse
Pseudomonas aeruginosa X78812 Complete Genome 5886
chromosome JBrowse
Pseudomonas aeruginosa Y31 Complete Genome 6402
chromosome JBrowse
Pseudomonas aeruginosa Y82 Complete Genome 6718
chromosome JBrowse
Pseudomonas aeruginosa Y89 Complete Genome 6546
chromosome JBrowse
plasmid pY89 JBrowse
Pseudomonas aeruginosa YL84 Complete Genome 5908
chromosome JBrowse
Pseudomonas alcaligenes NEB 585 Complete Genome 4049
chromosome JBrowse
Pseudomonas alcaliphila JAB1 Complete Genome 4889
chromosome JBrowse
Pseudomonas alkylphenolia KL28 Complete Genome 5283
chromosome JBrowse
Pseudomonas amygdali pv. lachrymans NM002 Complete Genome 5460
chromosome JBrowse
Pseudomonas amygdali pv. morsprunorum R15244 Complete Genome 5728
plasmid p1_tig4 JBrowse
plasmid p2_tig3 JBrowse
plasmid p3_tig5 JBrowse
plasmid p4_tig6 JBrowse
pv. morsprunorum strain R15244 chromosome JBrowse
Pseudomonas antarctica PAMC 27494 Complete Genome 5968
plasmid pP27494_1 JBrowse
plasmid pP27494_2 JBrowse
strain PAMC 27494 JBrowse
Pseudomonas avellanae R2leaf Complete Genome 5860
chromosome JBrowse
plasmid p1_tig4 JBrowse
plasmid p2_tig5 JBrowse
plasmid p3_tig6 JBrowse
plasmid p4_tig8 JBrowse
plasmid p5_tig9 JBrowse
Pseudomonas azotoformans F77 Complete Genome 5920
chromosome JBrowse
Pseudomonas azotoformans S4 Complete Genome 6085
chromosome JBrowse
Pseudomonas balearica DSM6083 (=SP1402) Complete Genome 4061
chromosome JBrowse
Pseudomonas brassicacearum DF41 Complete Genome 5745
chromosome JBrowse
Pseudomonas brassicacearum L13-6-12 Complete Genome 5867
chromosome JBrowse
Pseudomonas brassicacearum LBUM300 Complete Genome 6083
chromosome JBrowse
Pseudomonas cerasi isolate PL963 Complete Genome 5566
chromosome: 1. JBrowse
plasmid: PP1. JBrowse
plasmid: PP2. JBrowse
plasmid: PP3. JBrowse
plasmid: PP4. JBrowse
plasmid: PP5. JBrowse
plasmid: PP6. JBrowse