View alternate annotations in GBrowse or JBrowse

IMP: This is a list of Pseudomonas genomes that are available for viewing with the JBrowse Genome Browser. The list is currently limited to complete genomes, however we may adjust the criteria in the near future to include higher quality draft genomes.

The JBrowse viewer allows you to view multiple annotations from alternate resources as well as view and upload your own annotations including gene predictions and next-generation sequencing data. Please view the help doc on the browser page for more information.

We originally used the GBrowse viewer on this site but is no longer being actively developed by GMOD. We currently still host links to GBrowse views for genomes that were already loaded into GBrowse but we plan to phase them out in the near future. JBrowse has a superior interface for viewing gene annotations/NGS data and has a low performance overhead on our servers.

215 strains returned

= Reference strain, shown first by default
Strain Assembly Level Number of Genes Replicon
Pseudomonas stutzeri SLG510A3-8 Complete Genome 4282
chromosome JBrowse
Pseudomonas syringae CC1557 Complete Genome 5137
chromosome JBrowse
plasmid pCC1557 JBrowse
Pseudomonas syringae pv. actinidiae CRAFRU 12.29 Complete Genome 5809
chromosome JBrowse
plasmid unnamed JBrowse
Pseudomonas syringae pv. actinidiae CRAFRU 14.08 Complete Genome 5813
chromosome JBrowse
plasmid JBrowse
Pseudomonas syringae pv. actinidiae ICMP 18884 Complete Genome 5828
chromosome JBrowse
plasmid JBrowse
Pseudomonas syringae pv. actinidiae ICMP 9853 Complete Genome 5914
chromosome JBrowse
plasmid p9853_A JBrowse
plasmid p9853_B JBrowse
Pseudomonas syringae pv. actinidiae NZ-45 Complete Genome 6112
chromosome JBrowse
plasmid pPsa20586 JBrowse
Pseudomonas syringae pv. actinidiae NZ-47 Complete Genome 6069
chromosome JBrowse
plasmid pPsa22180a JBrowse
plasmid pPsa22180b JBrowse
Pseudomonas syringae pv. lapsa ATCC 10859 Complete Genome 5053
chromosome JBrowse
Pseudomonas syringae pv. syringae B301D Complete Genome 5265
chromosome JBrowse
Pseudomonas syringae pv. syringae B728a Complete Genome 5220
chromosome JBrowse GBrowse
Pseudomonas syringae pv. syringae HS191 Complete Genome 5224
chromosome JBrowse
HS191 JBrowse
Pseudomonas syringae UMAF0158 Complete Genome 5059
plasmid JBrowse
UMAF0158 JBrowse
Pseudomonas trivialis IHBB745 Complete Genome 5886
chromosome JBrowse
Pseudomonas veronii R02 Complete Genome 6169
chromosome JBrowse