View alternate annotations in GBrowse or JBrowse

IMP: This is a list of Pseudomonas genomes that are available for viewing with the JBrowse Genome Browser. The list is currently limited to complete genomes, however we may adjust the criteria in the near future to include higher quality draft genomes.

The JBrowse viewer allows you to view multiple annotations from alternate resources as well as view and upload your own annotations including gene predictions and next-generation sequencing data. Please view the help doc on the browser page for more information.

We originally used the GBrowse viewer on this site but is no longer being actively developed by GMOD. We currently still host links to GBrowse views for genomes that were already loaded into GBrowse but we plan to phase them out in the near future. JBrowse has a superior interface for viewing gene annotations/NGS data and has a low performance overhead on our servers.

335 strains returned

= Popular strains, shown first by default
Strain Assembly Level Number of Genes Replicon
Pseudomonas syringae pv. avii isolate CFBP3846 Complete Genome 5780
chromosome: 1. JBrowse
plasmid: PP1. JBrowse
plasmid: PP2. JBrowse
plasmid: PP3. JBrowse
plasmid: PP4. JBrowse
plasmid: PP5. JBrowse
Pseudomonas syringae pv. cerasicola isolate CFBP6109 Complete Genome 5374
chromosome: 1. JBrowse
plasmid: PP1. JBrowse
plasmid: PP2. JBrowse
plasmid: PP3. JBrowse
Pseudomonas syringae pv. lapsa ATCC 10859 Complete Genome 5053
chromosome JBrowse
Pseudomonas syringae pv. syringae B301D Complete Genome 5265
chromosome JBrowse
Pseudomonas syringae pv. syringae B728a - Assembly GCF_000012245.1 Complete Genome 5220
chromosome JBrowse GBrowse
Pseudomonas syringae pv. syringae HS191 Complete Genome 5224
chromosome JBrowse
HS191 JBrowse
Pseudomonas syringae pv. syringae isolate CFBP2118 Complete Genome 5204
chromosome JBrowse
Pseudomonas syringae pv. syringae isolate CFBP4215 Complete Genome 5209
chromosome JBrowse
Pseudomonas syringae pv. syringae Pss9097 Complete Genome 5095
chromosome JBrowse
Pseudomonas syringae pv. tomato B13-200 Complete Genome 6070
B13-200 chromosome JBrowse
plasmid pB13-200A JBrowse
plasmid pB13-200B JBrowse
plasmid pB13-200C JBrowse
Pseudomonas syringae UMAF0158 Complete Genome 5059
plasmid JBrowse
UMAF0158 JBrowse
Pseudomonas taetrolens NCTC10697 Complete Genome 4345
chromosome JBrowse
Pseudomonas trivialis IHBB745 Complete Genome 5886
chromosome JBrowse
Pseudomonas veronii R02 Complete Genome 6169
chromosome JBrowse
Pseudomonas viridiflava CFBP 1590 isolate E12-5 Complete Genome 5397
chromosome JBrowse