View alternate annotations in GBrowse or JBrowse

IMP: This is a list of Pseudomonas genomes that are available for viewing with the JBrowse Genome Browser. The list is currently limited to complete genomes, however we may adjust the criteria in the near future to include higher quality draft genomes.

The JBrowse viewer allows you to view multiple annotations from alternate resources as well as view and upload your own annotations including gene predictions and next-generation sequencing data. Please view the help doc on the browser page for more information.

We originally used the GBrowse viewer on this site but is no longer being actively developed by GMOD. We currently still host links to GBrowse views for genomes that were already loaded into GBrowse but we plan to phase them out in the near future. JBrowse has a superior interface for viewing gene annotations/NGS data and has a low performance overhead on our servers.

215 strains returned

= Reference strain, shown first by default
Strain Assembly Level Number of Genes Replicon
Pseudomonas aeruginosa PA_D25 Complete Genome 6080
chromosome JBrowse
Pseudomonas aeruginosa PA_D5 Complete Genome 6087
chromosome JBrowse
Pseudomonas aeruginosa PA_D9 Complete Genome 6065
chromosome JBrowse
Pseudomonas aeruginosa RP73 Complete Genome 5864
chromosome JBrowse GBrowse
Pseudomonas aeruginosa SCV20265 Complete Genome 6380
chromosome JBrowse
Pseudomonas aeruginosa SCVFeb Complete Genome 5794
chromosome JBrowse
Pseudomonas aeruginosa SCVJan Complete Genome 5794
chromosome JBrowse
Pseudomonas aeruginosa USDA-ARS-USMARC-41639 Complete Genome 5814
chromosome JBrowse
Pseudomonas aeruginosa VA-134 Complete Genome 5804
chromosome JBrowse
Pseudomonas aeruginosa VRFPA04 Complete Genome 6308
chromosome JBrowse
Pseudomonas aeruginosa YL84 Complete Genome 5908
chromosome JBrowse
Pseudomonas alcaligenes NEB 585 Complete Genome 4049
chromosome JBrowse
Pseudomonas alcaliphila JAB1 Complete Genome 4889
chromosome JBrowse
Pseudomonas alkylphenolia KL28 Complete Genome 5283
chromosome JBrowse
Pseudomonas amygdali pv. lachrymans NM002 Complete Genome 5460
chromosome JBrowse
Pseudomonas antarctica PAMC 27494 Complete Genome 5968
plasmid pP27494_1 JBrowse
plasmid pP27494_2 JBrowse
strain PAMC 27494 JBrowse
Pseudomonas azotoformans F77 Complete Genome 5920
chromosome JBrowse
Pseudomonas azotoformans S4 Complete Genome 6085
chromosome JBrowse
Pseudomonas balearica DSM6083 (=SP1402) Complete Genome 4061
chromosome JBrowse
Pseudomonas brassicacearum DF41 Complete Genome 5745
chromosome JBrowse