Pseudomonas savastanoi pv. phaseolicola 1448A

Strain Overview
Organism Name Pseudomonas savastanoi pv. phaseolicola 1448A
Species Pseudomonas savastanoi pv. phaseolicola
Strain 1448A
Subspecific Genetic Lineage
Description/Title Sample from Pseudomonas savastanoi pv. phaseolicola 1448A
Scaffolds
Contigs
Contig N50
Assembly Level Complete Genome
Percent GC
Annotated Genes 5437
References
Partial Genes
Cross-References
NCBI BioSample Accession SAMN02603162
NCBI Biosample ID 2603162
NCBI Taxonomy ID 264730
GOLD Accession
NCBI Bioprojects
NCBI Sequencing Assay
NCBI Assembly
Related Data
Additional Genome Project Info
Sequencing Information
Genome Assembly Information
Genome Browsers*
Pseudomonas syringae pv. phaseolicola 1448A chromosome, complete genome.
Pseudomonas syringae pv. phaseolicola 1448A large plasmid, complete sequence.
Pseudomonas syringae pv. phaseolicola 1448A small plasmid, complete sequence.

Annotated Features

Feature Count
gene 5437
CDS 5172
pseudo 184
tRNA 64
rRNA 16
misc_RNA 1

Subcellular Localization

Localization Count
Cytoplasmic 2229
Cytoplasmic Membrane 1163
Periplasmic 162
Outer Membrane 102
Extracellular 79
Unknown 1317
Unknown (This protein may have multiple localization sites) 120
Flagellar 18
Fimbrial 8
T3SS 4
Sample Provider
Name
E-mail
Institution
Date Collected
Geographic Location
Host Information
Host Species Taxonomic Name Phaseolus vulgaris
Host Species Common Name kidney bean
Host Species Taxonomy ID 3885
Host Species Disease halo blight

Replicons

Name Length GC
Pseudomonas syringae pv. phaseolicola 1448A chromosome, complete genome. 5928787 bp 58.0%
Replicon details
Pseudomonas syringae pv. phaseolicola 1448A large plasmid, complete sequence. 131950 bp 54.1%
Replicon details
Pseudomonas syringae pv. phaseolicola 1448A small plasmid, complete sequence. 51711 bp 56.0%
Replicon details

Download Sequences

Genomic ORF DNA Intergenic Amino Acid

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TAB CSV GBK EMBL GFF3 GFF3 + sequence GTF Orthologs

Download Intergenic Region Annotations

File also contains gene annotations

GTF