Pseudomonas aeruginosa LESB58

Strain Overview
Organism Name Pseudomonas aeruginosa LESB58
Species Pseudomonas aeruginosa
Strain LESB58
Subspecific Genetic Lineage
Description/Title Pseudomonas aeruginosa LESB58 - hypervirulent human isolate
Scaffolds
Contigs
Contig N50
Assembly Level Gapless Chromosome
Percent GC 66.3
Annotated Genes 6028
References
Partial Genes
Cross-References
NCBI BioSample Accession SAMEA1705916
NCBI Biosample ID
NCBI Taxonomy ID 557722
GOLD Accession Gp0001799
NCBI Bioprojects
NCBI Sequencing Assay
NCBI Assembly
Related Data
Additional Genome Project Info
Sequencing Information
Genome Assembly Information
Genome Browsers*
Pseudomonas aeruginosa LESB58 chromosome, complete genome.
*Note: Objects in Genome Browser currently link back to the non-beta version of www.pseudomonas.com

Annotated Features

Feature Count
gene 6028
CDS 5927
tRNA 67
pseudo 34
ncRNA 21
rRNA 13

Subcellular Localization

Localization Count
No localization assigned and computational localization prediction using PSORTB not performed 6
Cytoplasmic 2695
Cytoplasmic Membrane 1323
Periplasmic 172
Outer Membrane 170
Extracellular 74
Unknown 1379
Unknown (This protein may have multiple localization sites) 146
Flagellar 18
Fimbrial 6
Host Associated 6
T3SS 3
Sample Provider
Name
E-mail
Institution
Date Collected 1988
Geographic Location
Location Name United Kingdom: Liverpool
Isolation Source sputum
Host Information
Host Species Taxonomic Name Homo sapiens
Host Species Common Name human
Host Species Taxonomy ID 9606
Host Species Disease cystic fibrosis
Host Species Tissue Sampled lung

Replicons

Name Length GC
Pseudomonas aeruginosa LESB58 chromosome, complete genome. 6601757 bp 66.3%
Replicon details

Download Sequences

Genomic ORF DNA Intergenic Amino Acid

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TAB CSV GBK EMBL GFF3 GFF3 + sequence GTF Orthologs

Download Intergenic Region Annotations

File also contains gene annotations

GTF