Pseudomonas chlororaphis PA23

Strain Overview
Organism Name Pseudomonas chlororaphis PA23
Species Pseudomonas chlororaphis
Strain PA23
Subspecific Genetic Lineage
Description/Title Microbe sample from Pseudomonas chlororaphis
Scaffolds
Contigs
Contig N50
Assembly Level Complete Genome
Percent GC
Annotated Genes 6369
References
Partial Genes 65
Cross-References
NCBI BioSample Accession SAMN02780900
NCBI Biosample ID 2780900
NCBI Taxonomy ID 587753
GOLD Accession
NCBI Bioprojects
NCBI Sequencing Assay
NCBI Assembly
Related Data
Additional Genome Project Info
Sequencing Information
Genome Assembly Information
Genome Browsers*
Pseudomonas chlororaphis strain PA23, complete genome.

Annotated Features

Feature Count
gene 6345
CDS 6260
tRNA 68
pseudo 24
rRNA 16
ncRNA 1

Subcellular Localization

Localization Count
Cytoplasmic 2706
Cytoplasmic Membrane 1461
Periplasmic 218
Outer Membrane 167
Extracellular 70
Unknown 1489
Unknown (This protein may have multiple localization sites) 149
Sample Provider
Name Peter Loewen
E-mail peter.loewen@umanitoba.ca
Institution University of Manitoba
Date Collected 2004-04-17
Geographic Location
Location Name Manitoba
Isolation Source soybean root
Host Information

Replicons

Name Length GC
Pseudomonas chlororaphis strain PA23, complete genome. 7122173 bp 62.6%
Replicon details

Download Sequences

Genomic ORF DNA Intergenic Amino Acid

Download Gene Annotations

TAB CSV GBK EMBL GFF3 GFF3 + sequence GTF

Download Intergenic Region Annotations

File also contains gene annotations

GTF