Pseudomonas syringae pv. syringae B64

Strain Overview
Organism Name Pseudomonas syringae pv. syringae B64
Species Pseudomonas syringae pv. syringae
Strain B64
Description/Title Sample from Pseudomonas syringae pv. syringae B64
Annotated Genes 5019
Partial Genes 18
Host Information
Host Species Taxonomic Name Triticum aestivum
Host Species Common Name wheat
Host Species Taxonomy ID 4565
Geographic Location
Isolation Source leaf

MLST Data

Database Scheme Sequence Type Alleles
Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst).
Assembly
Assembly DB
RefSeq
Assembly Accession
Assembly Status latest
Scaffolds
Contigs 42
Contig N50 329354
Assembly Level Chromosome
Percent GC
Cross-References
NCBI BioSample Accession SAMN02472031
NCBI Taxonomy ID 1260626
NCBI Bioprojects
Related Data
Additional Genome Project Info
Sequencing Information
Genome Assembly Information
Genome Browsers*
Pseudomonas syringae pv. syringae B64 chromosome, whole genome shotgun sequence.

Annotated Features

Feature Count
gene 5008
CDS 4873
tRNA 61
rRNA 13
pseudo 11

Subcellular Localization

Localization Count
Cytoplasmic 2162
Cytoplasmic Membrane 1144
Periplasmic 159
Outer Membrane 95
Extracellular 59
Unknown 1133
Unknown (This protein may have multiple localization sites) 121
Flagellar 17
Fimbrial 4
T3SS 2

Replicons

Name Length GC
Pseudomonas syringae pv. syringae B64 chromosome, whole genome shotgun sequence. 5930035 bp 58.6%
Replicon details

Download Sequences

Genomic ORF DNA Intergenic Amino Acid

Download Gene Annotations

TSV CSV GBK EMBL GFF3 GFF3 + sequence GTF