Pseudomonas aeruginosa ATCC 27853

Strain Overview
Organism Name Pseudomonas aeruginosa ATCC 27853 - Assembly GCF_001086625.1
Species Pseudomonas aeruginosa
Strain ATCC 27853
Description/Title Pseudomonas aeruginosa ATCC
Annotated Genes
Partial Genes 1
Host Information
Host Species Taxonomic Name Homo sapiens
Host Species Common Name human
Host Species Taxonomy ID 9606
Host Species Disease Not Collected
Geographic Location
Location Name USA: Rochester, Minnesota
Isolation Source Associated Infection
Latitude/Longitude 44.0234 N 92.4630 W
Sample Provider
Name Daniel OBrien
E-mail obrien.daniel@mayo.edu
Institution The Mayo Clinic
Date Collected 13-Apr-2014

MLST Data

Database Scheme Sequence Type Alleles
PubMLST paeruginosa 155
guaA
36		 ppsA
13		 nuoD
3		 mutL
3		 acsA
28		 aroE
5		 trpE
7
Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst).
Assembly
Assembly DB
RefSeq
Assembly Accession
GCF_001086625.1
Assembly Status latest
Scaffolds
Contigs 21
Contig N50 2097247
Assembly Level Contig
Percent GC
Cross-References
NCBI BioSample Accession SAMN03787331
NCBI Taxonomy ID 287
NCBI Bioprojects
Related Data
Additional Genome Project Info
Sequencing Information
Genome Assembly Information
Details

Annotated Features

Feature Count
pseudo 1

Replicons

21 replicons associated with this assembly

Download Sequences

Genomic ORF DNA Intergenic Amino Acid

Download Gene Annotations

TSV CSV GBK EMBL GFF3 GFF3 + sequence GTF