Pseudomonas aeruginosa ATCC 33349

Strain Overview
Organism Name Pseudomonas aeruginosa ATCC 33349
Species Pseudomonas aeruginosa
Strain ATCC 33349
Description/Title Microbe sample from Pseudomonas aeruginosa
Annotated Genes 6211
Partial Genes 327
Host Information
Geographic Location
Isolation Source not collected
Sample Provider
Name Sandra Wingaard Thrane
E-mail sandra.w.thrane@gmail.com
Institution Technical University of Denmark
Date Collected

MLST Data

Database Scheme Sequence Type Alleles
PubMLST paeruginosa -
mutL
3
aroE
138
trpE
9
ppsA
4
acsA
17
guaA
11
nuoD
11
Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst).
Assembly
Assembly DB
RefSeq
Assembly Accession
Assembly Status latest
Scaffolds
Contigs 274
Contig N50 75248
Assembly Level Scaffold
Percent GC
Cross-References
NCBI BioSample Accession SAMN04028038
NCBI Taxonomy ID 287
NCBI Bioprojects
Related Data
Additional Genome Project Info
Sequencing Information
Genome Assembly Information

Annotated Features

Feature Count
gene 6211
CDS 6148
pseudo 275
tRNA 59
rRNA 3
ncRNA 1

Subcellular Localization

Localization Count
Cytoplasmic 2716
Cytoplasmic Membrane 1329
Periplasmic 174
Outer Membrane 160
Extracellular 80
Unknown 1554
Unknown (This protein may have multiple localization sites) 145
Flagellar 17
Fimbrial 9
T3SS 4
Outer Membrane Vesicle 19

Replicons

267 replicons associated with this assembly

Download Sequences

Genomic ORF DNA Intergenic Amino Acid

Download Gene Annotations

TSV CSV GBK EMBL GFF3 GFF3 + sequence GTF