Pseudomonas aeruginosa ATCC 43732

Strain Overview
Organism Name Pseudomonas aeruginosa ATCC 43732
Species Pseudomonas aeruginosa
Strain ATCC 43732
Description/Title Microbe sample from Pseudomonas aeruginosa
Annotated Genes 5966
Partial Genes 237
Host Information
Geographic Location
Isolation Source not collected
Sample Provider
Name Sandra Wingaard Thrane
E-mail sandra.w.thrane@gmail.com
Institution Technical University of Denmark
Date Collected

MLST Data

Database Scheme Sequence Type Alleles
PubMLST paeruginosa 447
trpE
60
ppsA
47
guaA
11
mutL
3
aroE
5
nuoD
1
acsA
40
Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst).
Assembly
Assembly DB
RefSeq
Assembly Accession
Assembly Status latest
Scaffolds
Contigs 216
Contig N50 78205
Assembly Level Scaffold
Percent GC
Cross-References
NCBI BioSample Accession SAMN04028056
NCBI Taxonomy ID 287
NCBI Bioprojects
Related Data
Additional Genome Project Info
Sequencing Information
Genome Assembly Information

Annotated Features

Feature Count
gene 5966
CDS 5904
pseudo 204
tRNA 58
rRNA 3
ncRNA 1

Subcellular Localization

Localization Count
Cytoplasmic 2642
Cytoplasmic Membrane 1335
Periplasmic 170
Outer Membrane 158
Extracellular 69
Unknown 1398
Unknown (This protein may have multiple localization sites) 141
Flagellar 17
Fimbrial 8
T3SS 4
Outer Membrane Vesicle 20

Replicons

206 replicons associated with this assembly

Download Sequences

Genomic ORF DNA Intergenic Amino Acid

Download Gene Annotations

TSV CSV GBK EMBL GFF3 GFF3 + sequence GTF