Pseudomonas aeruginosa 19BR

Strain Overview
Organism Name Pseudomonas aeruginosa 19BR
Species Pseudomonas aeruginosa
Strain 19BR
Description/Title Sample from Pseudomonas aeruginosa 19BR
Annotated Genes 6189
Partial Genes 4
Host Information
Host Species Taxonomic Name Homo sapiens
Host Species Common Name human
Host Species Taxonomy ID 9606
Geographic Location
Location Name Brazil

MLST Data

Database Scheme Sequence Type Alleles
PubMLST paeruginosa 277
mutL
11		 aroE
5		 nuoD
27		 ppsA
5		 guaA
9		 trpE
2		 acsA
39
Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst).
Assembly
Assembly DB
RefSeq
Assembly Accession
GCF_000223945.1
Assembly Status latest
Scaffolds 1
Contigs 1
Contig N50 6742964
Assembly Level Complete Genome
Percent GC
Cross-References
NCBI BioSample Accession SAMN02471401
NCBI Taxonomy ID 1051003
NCBI Bioprojects
Related Data
Additional Genome Project Info
Sequencing Information
Genome Assembly Information
Details
Genome Browsers*
Pseudomonas aeruginosa 19BR 19BR chromosome, whole genome shotgun sequence, complete genome.

Annotated Features

Feature Count
gene 6140
CDS 6031
tRNA 63
pseudo 49
rRNA 12
ncRNA 1

Subcellular Localization

Localization Count
Cytoplasmic 2722
Cytoplasmic Membrane 1328
Periplasmic 176
Outer Membrane 164
Extracellular 77
Unknown 1408
Unknown (This protein may have multiple localization sites) 156
Flagellar 17
Fimbrial 7
T3SS 4

Replicons

Name Length GC
Pseudomonas aeruginosa 19BR 19BR chromosome, whole genome shotgun sequence, complete genome. 6742964 bp 66.1%
Replicon details

Download Sequences

Genomic ORF DNA Intergenic Amino Acid

Download Gene Annotations

TSV CSV GBK EMBL GFF3 GFF3 + sequence GTF