Pseudomonas aeruginosa 0C4A isolate RP45

Strain Overview
Organism Name Pseudomonas aeruginosa 0C4A isolate RP45
Species Pseudomonas aeruginosa
Strain 0C4A isolate RP45
Subspecific Genetic Lineage
Description/Title Microbe sample from Pseudomonas aeruginosa
Scaffolds
Contigs 65
Contig N50 216197
Assembly Level Contig
Percent GC
Annotated Genes 5795
References
Partial Genes 106
Cross-References
NCBI BioSample Accession SAMN04256133
NCBI Biosample ID
NCBI Taxonomy ID 287
GOLD Accession
NCBI Bioprojects
NCBI Sequencing Assay
NCBI Assembly
Related Data
Additional Genome Project Info
Sequencing Information
Genome Assembly Information

Annotated Features

Feature Count
gene 5795
CDS 5731
pseudo 109
tRNA 57
rRNA 6
ncRNA 1

Subcellular Localization

Localization Count
Cytoplasmic 2624
Cytoplasmic Membrane 1318
Periplasmic 168
Outer Membrane 158
Extracellular 72
Unknown 1264
Unknown (This protein may have multiple localization sites) 139
Flagellar 17
Fimbrial 7
Host Associated 1
T3SS 4
Outer Membrane Vesicle 13
Sample Provider
Name Julie Jeukens
E-mail julie.jeukens.1@ulaval.ca
Institution University Laval
Date Collected 1995
Geographic Location
Location Name Germany: Hannover
Isolation Source cystic fibrosis airway
Host Information
Host Species Taxonomic Name Homo sapiens
Host Species Common Name human
Host Species Taxonomy ID 9606

Replicons

65 replicons associated with this assembly

Download Sequences

Genomic ORF DNA Intergenic Amino Acid

Download Gene Annotations

TAB CSV GBK EMBL GFF3 GFF3 + sequence GTF

Download Intergenic Region Annotations

File also contains gene annotations

GTF