Pseudomonas aeruginosa 105738

Strain Overview
Organism Name Pseudomonas aeruginosa 105738
Species Pseudomonas aeruginosa
Strain 105738
Subspecific Genetic Lineage
Description/Title Pathogen: Pseudomonas aeruginosa clinical sample from wounded military personnel
Scaffolds
Contigs 139
Contig N50 102664
Assembly Level Scaffold
Percent GC
Annotated Genes 6126
References
Partial Genes 165
Cross-References
NCBI BioSample Accession SAMN03076167
NCBI Biosample ID 3076167
NCBI Taxonomy ID 287
GOLD Accession
NCBI Bioprojects
NCBI Sequencing Assay
NCBI Assembly
Related Data
Additional Genome Project Info
Sequencing Information
Genome Assembly Information

Annotated Features

Feature Count
gene 6126
CDS 6059
pseudo 161
tRNA 59
rRNA 4
ncRNA 3
tmRNA 1

Subcellular Localization

Localization Count
Cytoplasmic 2754
Cytoplasmic Membrane 1372
Periplasmic 171
Outer Membrane 158
Extracellular 74
Unknown 1385
Unknown (This protein may have multiple localization sites) 155
Flagellar 17
Fimbrial 4
Host Associated 1
T3SS 4
Outer Membrane Vesicle 11
Sample Provider
Name SAMMC staff
E-mail arivetba@miamioh.edu
Institution Miami University
Date Collected
Geographic Location
Latitude/Longitude 29.46 N 98.41 W
Host Information
Host Species Taxonomic Name Homo sapiens
Host Species Common Name human
Host Species Taxonomy ID 9606
Host Species Disease Infection
Host Species Tissue Sampled wound

Replicons

137 replicons associated with this assembly

Download Sequences

Genomic ORF DNA Intergenic Amino Acid

Download Gene Annotations

TAB CSV GBK EMBL GFF3 GFF3 + sequence GTF

Download Intergenic Region Annotations

File also contains gene annotations

GTF