Pseudomonas aeruginosa ATCC 15692

Strain Overview
Organism Name Pseudomonas aeruginosa ATCC 15692
Species Pseudomonas aeruginosa
Strain ATCC 15692
Description/Title Genomic DNA of Pseudomonas aeruginosa ATCC 15692
Annotated Genes 5744
Partial Genes 2
Host Information
Geographic Location
Location Name not applicable
Isolation Source Infected wound
Sample Provider
Name Linhui Wang
E-mail 191337743@qq.com
Institution Dalian Hissen Bio-pharm., Ltd.
Date Collected not applicable

MLST Data

Database Scheme Sequence Type Alleles
PubMLST paeruginosa 549
trpE
7		 guaA
12		 acsA
7		 mutL
3		 aroE
5		 ppsA
1		 nuoD
4
Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst).
Assembly
Assembly DB
RefSeq
Assembly Accession
GCF_001729505.1
Assembly Status latest
Scaffolds
Contigs
Contig N50
Assembly Level Complete Genome
Percent GC
Cross-References
NCBI BioSample Accession SAMN05715193
NCBI Taxonomy ID 287
NCBI Bioprojects
Related Data
Additional Genome Project Info
Sequencing Information
Genome Assembly Information
Details
Genome Browsers*
Pseudomonas aeruginosa strain ATCC 15692, complete genome.

Annotated Features

Feature Count
gene 5744
CDS 5665
tRNA 63
pseudo 22
rRNA 12
ncRNA 3
tmRNA 1

Subcellular Localization

Localization Count
Cytoplasmic 2608
Cytoplasmic Membrane 1316
Periplasmic 181
Outer Membrane 175
Extracellular 80
Unknown 1219
Unknown (This protein may have multiple localization sites) 146
Flagellar 18
Fimbrial 5
Host Associated 5
T3SS 4
Outer Membrane Vesicle 84

Replicons

Name Length GC
Pseudomonas aeruginosa strain ATCC 15692, complete genome. 6276434 bp 66.5%
Replicon details

Download Sequences

Genomic ORF DNA Intergenic Amino Acid

Download Gene Annotations

TSV CSV GBK EMBL GFF3 GFF3 + sequence GTF