Pseudomonas aeruginosa PAO581

Strain Overview
Organism Name Pseudomonas aeruginosa PAO581 - Assembly GCF_000468555.2
Species Pseudomonas aeruginosa
Strain PAO581
Description/Title Sample from Pseudomonas aeruginosa PAO581
Annotated Genes 5577
Partial Genes
Host Information
Host Species Taxonomic Name Homo sapiens
Host Species Common Name human
Host Species Taxonomy ID 9606
Geographic Location

MLST Data

Database Scheme Sequence Type Alleles
PubMLST paeruginosa 549
guaA
12		 trpE
7		 ppsA
1		 aroE
5		 mutL
3		 nuoD
4		 acsA
7
Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst).
Assembly
Assembly DB
RefSeq
Assembly Accession
GCF_000468555.2
Assembly Status latest
Scaffolds 1
Contigs 202
Contig N50 325803
Assembly Level Chromosome
Percent GC
Cross-References
NCBI BioSample Accession SAMN02603587
NCBI Taxonomy ID 1352354
NCBI Bioprojects
Related Data
Additional Genome Project Info
Sequencing Information
Genome Assembly Information
Details
Genome Browsers*
Pseudomonas aeruginosa PAO581 genome.

Annotated Features

Feature Count
gene 5574
CDS 5496
tRNA 64
rRNA 12
pseudo 3

Subcellular Localization

Localization Count
Cytoplasmic 2546
Cytoplasmic Membrane 1270
Periplasmic 162
Outer Membrane 159
Extracellular 73
Unknown 1158
Unknown (This protein may have multiple localization sites) 128

Replicons

Name Length GC
Pseudomonas aeruginosa PAO581 genome. 6043974 bp 66.4%
Replicon details

Download Sequences

Genomic ORF DNA Intergenic Amino Acid

Download Gene Annotations

TSV CSV GBK EMBL GFF3 GFF3 + sequence GTF