Log of Annotation Updates

3314 annotation updates returned Previous1..25262728293031323334
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Date Locus Tag Strain Description Submitter
Sep 17, 2001 PA3115 Pseudomonas aeruginosa PAO1 Annotation of gene previously described as a hypothetical protein, with alt gene name fimV. New protein name: motility protein FimV. New gene name: fimV. New alt gene name: (now blank). New function: Motility & attachment; membrane proteins. New evidence reference (PubMed ID): 20307490. Research Biology Dept., Chiron-Seattle, USA
Sep 17, 2001 PA3182 Pseudomonas aeruginosa PAO1 Annotation of gene previously described as a conserved hypothetical protein, with alt gene name pgl. New protein name: 6-phosphogluconolactonase. New gene name: pgl. New alt gene name: (now blank). New function: Central intermediary metabolism. New evidence reference (PubMed ID): 20327572. Research Biology Dept., Chiron-Seattle, USA
Sep 17, 2001 PA3404 Pseudomonas aeruginosa PAO1 Protein name changed from probable secretion protein to new protein name: probable outer membrane protein precursor. New alt gene name: opmM. Jim Jo, Hancock Laboratory, University of British Columbia, Canada
Sep 17, 2001 PA3487 Pseudomonas aeruginosa PAO1 Annotation of a gene previously described as a probable phospholipase, with no gene name. New protein name: phospholipase D. New gene name: pldA. New genomic context: Not all strains contain pldA; in those that do, the flanking genes are also conserved. New evidence reference (PubMed ID): 21065119. Research Biology Dept., Chiron-Seattle, USA
Sep 17, 2001 PA3521 Pseudomonas aeruginosa PAO1 Protein name changed from probable outer membrane efflux protein precursor to new protein name: probable outer membrane protein precursor. New alt gene name: opmE. Jim Jo, Hancock Laboratory, University of British Columbia, Canada
Sep 17, 2001 PA3526 Pseudomonas aeruginosa PAO1 Addition of "precursor" to protein name Fiona Brinkman, Simon Fraser University, Canada
Sep 17, 2001 PA3627 Pseudomonas aeruginosa PAO1 Annotation of a gene previously described as a conserved hypothetical protein, with alt gene name ygbB. New protein name: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase. New alt protein name: YgbB protein. New gene name: ygbB. New alt gene name: (now blank). New function: Biosynthesis of cofactors, prosthetic groups and carriers. New evidence reference (PubMed ID): 20183914. Research Biology Dept., Chiron-Seattle, USA
Sep 17, 2001 PA3633 Pseudomonas aeruginosa PAO1 Annotation of a gene previously described as a conserved hypothetical protein, with alt gene name ygbP. New protein name: 4-diphosphocytidyl-2-C-methylerythritol synthase. New alt protein name: YgbP protein. New gene name: ygbP. New alt gene name: (now blank). New function: Biosynthesis of cofactors, prosthetic groups and carriers. New evidence reference (PubMed ID): 99449755. Research Biology Dept., Chiron-Seattle, USA
Sep 17, 2001 PA3648 Pseudomonas aeruginosa PAO1 Addition of "precursor" to protein name Fiona Brinkman, Simon Fraser University, Canada
Sep 17, 2001 PA3692 Pseudomonas aeruginosa PAO1 Addition of "precursor" to protein name Fiona Brinkman, Simon Fraser University, Canada
Sep 17, 2001 PA3803 Pseudomonas aeruginosa PAO1 Annotation of a gene previously described as a conserved hypothetical protein, with alt gene name gcpE. New protein name: probable isoprenoid biosynthetic protein GcpE. New gene name: gcpE. New alt gene name: (now blank). New function: Putative enzymes. New pathways: Terpenoid biosynthesis. New evidence reference (PubMed ID): 21172855. Research Biology Dept., Chiron-Seattle, USA
Sep 17, 2001 PA3857 Pseudomonas aeruginosa PAO1 Annotation of a gene previously described as a conserved hypothetical protein, with no gene name. New protein name: phosphatidylcholine synthase. New function: Fatty acid and phospholipid metabolism. New homology: 59% similar to phosphatidylcholine synthase [Sinorhizobium meliloti]. New evidence reference (PubMed ID): 20317087. Research Biology Dept., Chiron-Seattle, USA
Sep 17, 2001 PA3866 Pseudomonas aeruginosa PAO1 PA3866 is correctly described as a pyocin protein. However, the ORF immediately downstream was apparently not recognized, although it is 31 % identical to the colicin E5 immunity protein. This is the putative immunity protein of this pyocin whose C-terminal domain is likely conferring tRNAse activity. New evidence reference (PubMed ID): 10652108. Rene De Mot, Kardinaal Mercierlaan, Belgium
Sep 17, 2001 PA3894 Pseudomonas aeruginosa PAO1 Annotation of a gene previously described as a hypothetical protein, with no gene name. New protein name: probable outer membrane protein precursor. New alt gene name: opmI. Jim Jo, Hancock Laboratory, University of British Columbia, Canada
3314 annotation updates returned Previous1..25262728293031323334