Pathway Tools Tip

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Pathway Tools Query Page

Genome Browser:

Query All (by name or EC#) Protein (by name or EC#) Pathway (by name) Reaction (by name or EC#) Compound (by name) Gene (by name) RNA (by name)

• To retrieve objects by name, first select the type of object you wish to retrieve, then enter the name of the object and click Submit. All objects containing that name as a substring will be returned. To search for multiple objects in one query, enter multiple names or EC numbers, separated by commas.

Browse Ontology: Pathways  EC Hierarchy  Compounds  Gene Ontology  MultiFun Gene Taxonomy 

• Each database contains classification hierarchies for pathways, for reactions (the enzyme nomenclature system), for compounds, and for genes. Select a classification system to browse.

Cellular Overview Diagram/Omics Viewer (not available for MetaCyc)