Pseudomonas aeruginosa PAO1, PA0076 (tagF1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Protein secretion/export apparatus Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Hcp secretion island I (HSI-I) type VI secretion system ECO:0000037
not_recorded
KEGG pae02025 Biofilm formation - Pseudomonas aeruginosa 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF09867 TagF N-terminal domain, Type VI secretion system-associated IPR017748 T6S-associated protein TagF 5 139 1.5E-47
TIGRFAM TIGR03373 VI_minor_4: type VI secretion-associated protein, BMA_A0400 family IPR017748 T6S-associated protein TagF 5 139 1.3E-48
Gene3D G3DSA:3.40.1730.10 IPR038225 T6S-associated protein TagF superfamily 1 226 9.8E-94
PIRSF PIRSF029287 IPR017748 T6S-associated protein TagF 1 219 1.5E-98

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.