Pseudomonas aeruginosa PAO1, PA0082 (tssA1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0033104 type VI protein secretion system complex
IDA
Inferred from Direct Assay
ECO:0005033
27288401 Reviewed by curator
Molecular Function GO:0005515 protein binding
Interaction partner: PseudoCAP:PA0085
IPI
Inferred from Physical Interaction
ECO:0000025
hybrid interaction evidence
27288401 Reviewed by curator

Functional Classifications Manually Assigned by PseudoCAP

Protein secretion/export apparatus Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Hcp secretion island I (HSI-I) type VI secretion system ECO:0000037
not_recorded
KEGG pae02025 Biofilm formation - Pseudomonas aeruginosa 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR03363 JCVI: type VI secretion system protein TssA IPR017740 Type VI secretion system protein TssA-like 3 340 8.9E-99
Pfam PF06812 ImpA, N-terminal, type VI secretion system IPR010657 ImpA, N-terminal 8 131 1.2E-33
PANTHER PTHR37951 CYTOPLASMIC PROTEIN-RELATED IPR017740 Type VI secretion system protein TssA-like 1 343 3.6E-106

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.