Pseudomonas aeruginosa PAO1, PA0091 (vgrG1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0033104 type VI protein secretion system complex
IGC
Inferred from Genomic Context

16763151 Reviewed by curator
Biological Process GO:0033103 protein secretion by the type VI secretion system
IGC
Inferred from Genomic Context

16763151 Reviewed by curator
Biological Process GO:0033103 protein secretion by the type VI secretion system
IMP
Inferred from Mutant Phenotype
ECO:0000315
mutant phenotype evidence used in manual assertion
21325275 Reviewed by curator
Cellular Component GO:0033104 type VI protein secretion system complex
IDA
Inferred from Direct Assay
ECO:0000314
direct assay evidence used in manual assertion
20114026 Reviewed by curator
Cellular Component GO:0033104 type VI protein secretion system complex
IMP
Inferred from Mutant Phenotype
ECO:0000315
mutant phenotype evidence used in manual assertion
21325275 Reviewed by curator
Biological Process GO:0033103 protein secretion by the type VI secretion system
IDA
Inferred from Direct Assay
ECO:0000314
direct assay evidence used in manual assertion
20114026 Reviewed by curator

Functional Classifications Manually Assigned by PseudoCAP

Protein secretion/export apparatus Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae03070 Bacterial secretion system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF04717 Type VI secretion system/phage-baseplate injector OB domain IPR006531 Gp5/Type VI secretion system Vgr protein, OB-fold domain 383 450 5.4E-15
SUPERFAMILY SSF69349 Phage fibre proteins - - 439 623 7.69E-42
Gene3D G3DSA:3.55.50.10 - - - 95 186 0.0
NCBIfam TIGR03361 JCVI: type VI secretion system tip protein TssI/VgrG N-terminal domain IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset 8 520 0.0
FunFam G3DSA:2.40.50.230:FF:000001 Type VI secretion protein VgrG - - 352 454 7.5E-62
FunFam G3DSA:4.10.220.110:FF:000001 VgrG1 - - 221 283 1.1E-33
SUPERFAMILY SSF69279 Phage tail proteins - - 187 360 4.42E-36
Pfam PF05954 Phage tail baseplate hub (GPD) - - 26 326 2.4E-104
Gene3D G3DSA:4.10.220.110 - - - 221 283 0.0
Gene3D G3DSA:2.30.110.50 - - - 12 330 0.0
Gene3D G3DSA:2.40.50.230 - IPR037026 Vgr protein, OB-fold domain superfamily 352 454 5.0E-46
SUPERFAMILY SSF69279 Phage tail proteins - - 8 181 2.38E-62
SUPERFAMILY SSF69255 gp5 N-terminal domain-like - - 362 449 1.15E-35
FunFam G3DSA:3.55.50.10:FF:000001 Actin cross-linking toxin VgrG1 - - 95 186 2.2E-44
PANTHER PTHR32305 - - - 23 624 3.1E-96
NCBIfam TIGR01646 JCVI: type VI secretion system tip protein VgrG IPR006533 Type VI secretion system, RhsGE-associated Vgr protein 20 503 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.