Pseudomonas aeruginosa PAO1, PA0095

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0033103	protein secretion by the type VI secretion system	IMP Inferred from Mutant Phenotype	ECO:0000315 mutant phenotype evidence used in manual assertion	21325275	Reviewed by curator
Cellular Component	GO:0033104	type VI protein secretion system complex	IMP Inferred from Mutant Phenotype	ECO:0000315 mutant phenotype evidence used in manual assertion	21325275	Reviewed by curator

Functional Classifications Manually Assigned by PseudoCAP

Hypothetical, unclassified, unknown Other PAO1 genes in this class

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pae03070	Bacterial secretion system	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SUPERFAMILY	SSF69279	Phage tail proteins	-	-	11	184	7.65E-64
SUPERFAMILY	SSF69279	Phage tail proteins	-	-	189	363	5.1E-37
FunFam	G3DSA:3.55.50.10:FF:000001	Actin cross-linking toxin VgrG1	-	-	98	189	1.8E-44
NCBIfam	TIGR01646	JCVI: type VI secretion system tip protein VgrG	IPR006533	Type VI secretion system, RhsGE-associated Vgr protein	22	506	0.0
Pfam	PF06715	Gp5 C-terminal repeat (3 copies)	IPR010609	Gp5, C-terminal	633	656	6.1E-5
NCBIfam	TIGR03361	JCVI: type VI secretion system tip protein TssI/VgrG N-terminal domain	IPR017847	Type VI secretion system, RhsGE-associated Vgr family subset	11	524	0.0
MobiDBLite	mobidb-lite	consensus disorder prediction	-	-	614	678	-
FunFam	G3DSA:2.40.50.230:FF:000001	Type VI secretion protein VgrG	-	-	355	457	5.3E-62
Gene3D	G3DSA:3.55.50.10	-	-	-	98	189	0.0
Gene3D	G3DSA:2.40.50.230	-	IPR037026	Vgr protein, OB-fold domain superfamily	355	457	6.5E-46
SUPERFAMILY	SSF69349	Phage fibre proteins	-	-	580	723	8.63E-24
Gene3D	G3DSA:4.10.220.110	-	-	-	224	286	0.0
PANTHER	PTHR32305	-	-	-	15	662	5.9E-99
SUPERFAMILY	SSF69255	gp5 N-terminal domain-like	-	-	365	452	1.36E-35
Pfam	PF05954	Phage tail baseplate hub (GPD)	-	-	29	329	3.9E-106
FunFam	G3DSA:4.10.220.110:FF:000001	VgrG1	-	-	224	286	4.7E-31
SUPERFAMILY	SSF69349	Phage fibre proteins	-	-	442	608	8.63E-49
Pfam	PF04717	Type VI secretion system/phage-baseplate injector OB domain	IPR006531	Gp5/Type VI secretion system Vgr protein, OB-fold domain	386	453	6.5E-15
Gene3D	G3DSA:2.30.110.50	-	-	-	15	333	0.0
Pfam	PF06715	Gp5 C-terminal repeat (3 copies)	IPR010609	Gp5, C-terminal	529	552	2.7E-5
MobiDBLite	mobidb-lite	consensus disorder prediction	-	-	614	669	-

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.