Pseudomonas aeruginosa PAO1, PA0158 (triC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00702
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00702
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00702
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other PAO1 genes in this class
Antibiotic resistance and susceptibility Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00873 AcrB/AcrD/AcrF family IPR001036 Acriflavin resistance protein 8 1005 0.0
Gene3D G3DSA:3.30.70.1430 554 653 0.0
SUPERFAMILY SSF82714 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains 189 267 7.85E-10
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 466 489 4.8E-22
SUPERFAMILY SSF82693 141 327 1.39E-17
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 334 357 4.8E-22
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 388 412 4.8E-22
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 539 556 4.8E-22
SUPERFAMILY SSF82693 44 139 4.36E-19
Gene3D G3DSA:3.30.70.1430 44 800 0.0
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 42 60 4.8E-22
Gene3D G3DSA:3.30.70.1440 654 852 0.0
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 441 464 4.8E-22
SUPERFAMILY SSF82714 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains 707 790 5.23E-15
SUPERFAMILY SSF82693 553 653 2.49E-8
Gene3D G3DSA:1.20.1640.10 15 509 0.0
Gene3D G3DSA:3.30.2090.10 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains 704 792 0.0
SUPERFAMILY SSF82866 295 492 8.11E-32
Gene3D G3DSA:3.30.2090.10 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains 183 272 0.0
Gene3D G3DSA:1.20.1640.10 510 1004 0.0
Gene3D G3DSA:3.30.70.1320 140 330 0.0
SUPERFAMILY SSF82866 789 1010 3.66E-44

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.