Pseudomonas aeruginosa PAO1, PA0197 (tonB2)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Upstream Motifs

*Up to 500bp upstream
Name Start Stop Strand Evidence PMID
OxyR binding site 227262 227276 - ECO:0000314
direct assay evidence used in manual assertion
22275523 Details
Inverted repeat: AACCCCGGCC-N2-GGCCGGGGTT 227060 227081 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details
Rho-independent transcription terminator TERM 40 227062 227079 + ECO:0000246
computational combinatorial evidence used in automatic assertion
17313685 Details

Motifs annotated in this feature

Name Start Stop Strand Evidence PMID
Inverted repeat: CCGGTGGTGG-N44-CCACCACCGG 227670 227733 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details
Inverted repeat: GCCGGCGCCG-N58-CGGCGCCGGC 227819 227896 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details
Inverted repeat: CCGGCGCCGG-N56-CCGGCGCCGG 227886 227961 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details

Downstream motifs

*Up to 500bp downstream
Name Start Stop Strand Evidence PMID
Inverted repeat: GATCAGCGCG-N44-CGCGCTGATC 228669 228732 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details