Pseudomonas aeruginosa PAO1, PA0223

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.20.20.70
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016829 lyase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF001365
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Amino acid biosynthesis and metabolism Other PAO1 genes in this class
Cell wall / LPS / capsule Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae01130 Biosynthesis of antibiotics 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae00300 Lysine biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae01230 Biosynthesis of amino acids 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCyc P4-PWY superpathway of L-lysine, L-threonine and L-methionine biosynthesis I 19.5 ECO:0000250
sequence similarity evidence used in manual assertion 		12867747
KEGG pae00261 Monobactam biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCyc DAPLYSINESYN-PWY L-lysine biosynthesis I 19.5 ECO:0000250
sequence similarity evidence used in manual assertion 		12867747

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM01130 IPR002220 DapA-like 4 293 2.1E-99
CDD cd00408 DHDPS-like 8 289 4.24216E-100
Pfam PF00701 Dihydrodipicolinate synthetase family IPR002220 DapA-like 6 290 3.9E-55
Gene3D G3DSA:3.20.20.70 IPR013785 Aldolase-type TIM barrel 3 293 2.3E-111
PRINTS PR00146 Dihydrodipicolinate synthase signature IPR002220 DapA-like 131 148 1.8E-10
PRINTS PR00146 Dihydrodipicolinate synthase signature IPR002220 DapA-like 74 92 1.8E-10
PIRSF PIRSF001365 IPR002220 DapA-like 1 293 6.6E-87
PRINTS PR00146 Dihydrodipicolinate synthase signature IPR002220 DapA-like 106 122 1.8E-10
PRINTS PR00146 Dihydrodipicolinate synthase signature IPR002220 DapA-like 38 59 1.8E-10
SUPERFAMILY SSF51569 3 292 1.15E-85

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.