Pseudomonas aeruginosa PAO1, PA1071 (braF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0015808 L-alanine transport
IMP
Inferred from Mutant Phenotype
ECO:0000315
mutant phenotype evidence used in manual assertion
18833300 Reviewed by curator
Biological Process GO:1903805 L-valine import across plasma membrane
IMP
Inferred from Mutant Phenotype
ECO:0000315
mutant phenotype evidence used in manual assertion
18833300 Reviewed by curator
Biological Process GO:0006810 transport
IDA
Inferred from Direct Assay
ECO:0000002
direct assay evidence
Biological Process GO:1903806 L-isoleucine import across plasma membrane
IMP
Inferred from Mutant Phenotype
ECO:0000315
mutant phenotype evidence used in manual assertion
18833300 Reviewed by curator
Biological Process GO:0042941 D-alanine transport
IMP
Inferred from Mutant Phenotype
ECO:0000315
mutant phenotype evidence used in manual assertion
18833300 Reviewed by curator
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00005
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae02024 Quorum sensing 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 4 254 3.8E-63
Pfam PF00005 ABC transporter IPR003439 ABC transporter-like, ATP-binding domain 22 181 5.8E-34
FunFam G3DSA:3.40.50.300:FF:000317 Amino acid ABC transporter ATP-binding protein - - 4 254 0.0
Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal 233 255 2.0E-11
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 4 253 2.24E-63
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 30 231 2.0E-10
CDD cd03219 ABC_Mj1267_LivG_branched - - 6 247 7.0278E-124
PANTHER PTHR45772 CONSERVED COMPONENT OF ABC TRANSPORTER FOR NATURAL AMINO ACIDS-RELATED - - 1 255 2.5E-128

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.