Pseudomonas aeruginosa PAO1, PA1171 (sltB2)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Shine-Dalgarno sequence | 1270962 | 1270965 | + |
ECO:0000256
match to sequence model evidence used in automatic assertion |
Details |
Motifs annotated in this feature
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| AmrZ binding site | 1271942 | 1271954 | - |
ECO:0000314
direct assay evidence used in manual assertion |
24603766 | Details |
| Inverted repeat: GCCTTCTTCT-N80-AGAAGAAGGC | 1270979 | 1271078 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: CGGCCTGCAG-N57-CTGCAGGCCG | 1271061 | 1271137 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: GCGCCGCCCG-N5-CGGGCGGCGC | 1272176 | 1272200 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |