Pseudomonas aeruginosa PAO1, PA1223

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00126	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003700	DNA-binding transcription factor activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00126	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SUPERFAMILY	SSF46785	Winged helix DNA-binding domain	IPR036390	Winged helix DNA-binding domain superfamily	4	85	9.46E-18
Gene3D	G3DSA:1.10.10.10	-	IPR036388	Winged helix-like DNA-binding domain superfamily	1	88	1.1E-19
SUPERFAMILY	SSF53850	Periplasmic binding protein-like II	-	-	91	294	7.42E-43
Gene3D	G3DSA:3.40.190.10	-	-	-	172	268	4.3E-65
CDD	cd08461	PBP2_DntR_like_3	-	-	99	296	2.4914E-106
PANTHER	PTHR30118	HTH-TYPE TRANSCRIPTIONAL REGULATOR LEUO-RELATED	-	-	1	295	2.8E-91
Pfam	PF03466	LysR substrate binding domain	IPR005119	LysR, substrate-binding	95	295	4.6E-34
Gene3D	G3DSA:3.40.190.10	-	-	-	91	293	4.3E-65
Pfam	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family	IPR000847	Transcription regulator HTH, LysR	9	68	5.8E-13

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.