Pseudomonas aeruginosa PAO1, PA3155 (wbpE)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0000271 polysaccharide biosynthetic process
IDA
Inferred from Direct Assay
ECO:0000314
direct assay evidence used in manual assertion
19282284 Reviewed by curator
Biological Process GO:0006065 UDP-glucuronate biosynthetic process
EXP
Inferred from Experiment
ECO:0000269
experimental evidence used in manual assertion
19282284 Reviewed by curator
Molecular Function GO:0008483 transaminase activity
EXP
Inferred from Experiment
ECO:0000269
experimental evidence used in manual assertion
19282284 Reviewed by curator
Biological Process GO:0009243 O antigen biosynthetic process
EXP
Inferred from Experiment
ECO:0000269
experimental evidence used in manual assertion
18621892 Reviewed by curator

Functional Classifications Manually Assigned by PseudoCAP

Cell wall / LPS / capsule Other PAO1 genes in this class
Putative enzymes Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae00520 Amino sugar and nucleotide sugar metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCAP UDP-2,3-diacetamido-2,3-dideoxy-d-mannuronic acid biosynthesis pathway ECO:0000037
not_recorded
PseudoCAP Lipopolysaccharide biosynthesis ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase 14 357 2.1E-117
Gene3D G3DSA:3.90.1150.10 Aspartate Aminotransferase, domain 1 IPR015422 Pyridoxal phosphate-dependent transferase, small domain 245 359 7.2E-32
FunFam G3DSA:3.40.640.10:FF:000089 Aminotransferase, DegT/DnrJ/EryC1/StrS family - - 1 244 2.5E-116
PIRSF PIRSF000390 PLP_StrS IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase 1 359 5.9E-104
Gene3D G3DSA:3.40.640.10 - IPR015421 Pyridoxal phosphate-dependent transferase, major domain 1 244 9.3E-97
SUPERFAMILY SSF53383 PLP-dependent transferases IPR015424 Pyridoxal phosphate-dependent transferase 15 358 3.86E-109
CDD cd00616 AHBA_syn IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase 22 357 0.0
PANTHER PTHR30244 TRANSAMINASE IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase 9 358 1.6E-106

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.