Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0006412 | translation | Inferred from Sequence or Structural Similarity | ECO:0000250 sequence similarity evidence used in manual assertion |
9677288 | Reviewed by curator |
Biological Process | GO:0044267 | cellular protein metabolic process | Inferred from Sequence or Structural Similarity | ECO:0000044 sequence similarity evidence |
||
Molecular Function | GO:0003676 | nucleic acid binding |
Inferred from Sequence Model
Term mapped from: InterPro:PF00575
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003723 | RNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00717
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006412 | translation |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00717
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Cellular Component | GO:0005840 | ribosome |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00717
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003735 | structural constituent of ribosome |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00717
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Database | Xref | Pathway | Version | Evidence | PMID |
---|---|---|---|---|---|
KEGG | pae03010 | Ribosome | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
FunFam | G3DSA:2.40.50.140:FF:000011 | 30S ribosomal protein S1 | - | - | 270 | 357 | 1.0E-48 |
SUPERFAMILY | SSF50249 | Nucleic acid-binding proteins | IPR012340 | Nucleic acid-binding, OB-fold | 189 | 277 | 1.94E-27 |
PRINTS | PR00681 | Ribosomal protein S1 signature | IPR035104 | Ribosomal protein S1-like | 212 | 233 | 1.3E-88 |
SMART | SM00316 | S1_6 | IPR022967 | RNA-binding domain, S1 | 190 | 260 | 1.4E-28 |
Pfam | PF00575 | S1 RNA binding domain | IPR003029 | S1 domain | 189 | 260 | 3.6E-21 |
FunFam | G3DSA:2.40.50.140:FF:000021 | 30S ribosomal protein S1 | - | - | 6 | 97 | 3.8E-45 |
Gene3D | G3DSA:2.40.50.140 | - | IPR012340 | Nucleic acid-binding, OB-fold | 6 | 98 | 8.1E-20 |
SMART | SM00316 | S1_6 | IPR022967 | RNA-binding domain, S1 | 19 | 87 | 2.0E-5 |
Coils | Coil | Coil | - | - | 517 | 537 | - |
SUPERFAMILY | SSF50249 | Nucleic acid-binding proteins | IPR012340 | Nucleic acid-binding, OB-fold | 255 | 355 | 6.56E-26 |
NCBIfam | TIGR00717 | JCVI: 30S ribosomal protein S1 | IPR000110 | Small ribosomal subunit protein bS1 | 3 | 520 | 0.0 |
PRINTS | PR00681 | Ribosomal protein S1 signature | IPR035104 | Ribosomal protein S1-like | 126 | 143 | 1.3E-88 |
Gene3D | G3DSA:2.40.50.140 | - | IPR012340 | Nucleic acid-binding, OB-fold | 357 | 444 | 2.1E-25 |
PRINTS | PR00681 | Ribosomal protein S1 signature | IPR035104 | Ribosomal protein S1-like | 108 | 124 | 1.3E-88 |
SMART | SM00316 | S1_6 | IPR022967 | RNA-binding domain, S1 | 362 | 434 | 9.7E-21 |
Pfam | PF00575 | S1 RNA binding domain | IPR003029 | S1 domain | 361 | 434 | 2.3E-18 |
FunFam | G3DSA:2.40.50.140:FF:000018 | 30S ribosomal protein S1 | - | - | 183 | 267 | 9.0E-49 |
SMART | SM00316 | S1_6 | IPR022967 | RNA-binding domain, S1 | 103 | 171 | 1.3E-8 |
PRINTS | PR00681 | Ribosomal protein S1 signature | IPR035104 | Ribosomal protein S1-like | 21 | 39 | 1.3E-88 |
PRINTS | PR00681 | Ribosomal protein S1 signature | IPR035104 | Ribosomal protein S1-like | 330 | 348 | 1.3E-88 |
SUPERFAMILY | SSF50249 | Nucleic acid-binding proteins | IPR012340 | Nucleic acid-binding, OB-fold | 104 | 185 | 8.95E-15 |
Gene3D | G3DSA:2.40.50.140 | - | IPR012340 | Nucleic acid-binding, OB-fold | 99 | 183 | 5.5E-8 |
Pfam | PF00575 | S1 RNA binding domain | IPR003029 | S1 domain | 19 | 85 | 3.3E-7 |
Pfam | PF00575 | S1 RNA binding domain | IPR003029 | S1 domain | 275 | 347 | 4.4E-21 |
CDD | cd05691 | S1_RPS1_repeat_ec6 | - | - | 451 | 523 | 1.15858E-29 |
CDD | cd05688 | S1_RPS1_repeat_ec3 | - | - | 191 | 258 | 1.67183E-36 |
SMART | SM00316 | S1_6 | IPR022967 | RNA-binding domain, S1 | 449 | 520 | 2.6E-21 |
SUPERFAMILY | SSF50249 | Nucleic acid-binding proteins | IPR012340 | Nucleic acid-binding, OB-fold | 429 | 536 | 8.95E-24 |
PRINTS | PR00681 | Ribosomal protein S1 signature | IPR035104 | Ribosomal protein S1-like | 84 | 103 | 1.3E-88 |
Gene3D | G3DSA:2.40.50.140 | - | IPR012340 | Nucleic acid-binding, OB-fold | 267 | 356 | 5.5E-29 |
CDD | cd05689 | S1_RPS1_repeat_ec4 | - | - | 274 | 345 | 6.67066E-40 |
SMART | SM00316 | S1_6 | IPR022967 | RNA-binding domain, S1 | 275 | 347 | 1.8E-26 |
Pfam | PF00575 | S1 RNA binding domain | IPR003029 | S1 domain | 448 | 520 | 5.1E-15 |
FunFam | G3DSA:2.40.50.140:FF:000017 | 30S ribosomal protein S1 | - | - | 98 | 181 | 8.2E-49 |
PRINTS | PR00681 | Ribosomal protein S1 signature | IPR035104 | Ribosomal protein S1-like | 290 | 309 | 1.3E-88 |
Gene3D | G3DSA:2.40.50.140 | - | IPR012340 | Nucleic acid-binding, OB-fold | 445 | 528 | 6.3E-22 |
Gene3D | G3DSA:2.40.50.140 | - | IPR012340 | Nucleic acid-binding, OB-fold | 184 | 265 | 8.3E-28 |
CDD | cd04465 | S1_RPS1_repeat_ec2_hs2 | - | - | 105 | 171 | 1.62475E-28 |
SUPERFAMILY | SSF50249 | Nucleic acid-binding proteins | IPR012340 | Nucleic acid-binding, OB-fold | 342 | 440 | 7.46E-23 |
FunFam | G3DSA:2.40.50.140:FF:000016 | 30S ribosomal protein S1 | - | - | 358 | 444 | 8.0E-47 |
Pfam | PF00575 | S1 RNA binding domain | IPR003029 | S1 domain | 103 | 171 | 1.5E-11 |
PRINTS | PR00681 | Ribosomal protein S1 signature | IPR035104 | Ribosomal protein S1-like | 155 | 175 | 1.3E-88 |
PANTHER | PTHR10724 | 30S RIBOSOMAL PROTEIN S1 | - | - | 276 | 360 | 0.0 |
SUPERFAMILY | SSF50249 | Nucleic acid-binding proteins | IPR012340 | Nucleic acid-binding, OB-fold | 1 | 112 | 1.33E-20 |
CDD | cd05687 | S1_RPS1_repeat_ec1_hs1 | - | - | 21 | 87 | 2.47572E-13 |
PRINTS | PR00681 | Ribosomal protein S1 signature | IPR035104 | Ribosomal protein S1-like | 39 | 53 | 1.3E-88 |