Pseudomonas aeruginosa PAO1, PA3777 (xseA)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0008855	exodeoxyribonuclease VII activity	ISS Inferred from Sequence or Structural Similarity	ECO:0000250 sequence similarity evidence used in manual assertion	3021756	Reviewed by curator
Biological Process	GO:0006259	DNA metabolic process	ISS Inferred from Sequence or Structural Similarity	ECO:0000044 sequence similarity evidence
Molecular Function	GO:0003676	nucleic acid binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PF13742	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006308	DNA catabolic process	ISM Inferred from Sequence Model Term mapped from: InterPro:PTHR30008	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0008855	exodeoxyribonuclease VII activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PTHR30008	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Cellular Component	GO:0009318	exodeoxyribonuclease VII complex	ISM Inferred from Sequence Model Term mapped from: InterPro:PTHR30008	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

DNA replication, recombination, modification and repair Other PAO1 genes in this class

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pae03430	Mismatch repair	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Coils	Coil	Coil	-	-	360	380	-
Pfam	PF13742	OB-fold nucleic acid binding domain	IPR025824	OB-fold nucleic acid binding domain	16	108	6.9E-29
NCBIfam	TIGR00237	JCVI: exodeoxyribonuclease VII large subunit	IPR003753	Exonuclease VII, large subunit	17	360	0.0
Coils	Coil	Coil	-	-	315	335	-
CDD	cd04489	ExoVII_LU_OBF	IPR025824	OB-fold nucleic acid binding domain	35	112	5.4587E-37
Pfam	PF02601	Exonuclease VII, large subunit	IPR020579	Exonuclease VII, large subunit, C-terminal	132	443	4.5E-100
Hamap	MF_00378	Exodeoxyribonuclease 7 large subunit [xseA].	IPR003753	Exonuclease VII, large subunit	13	446	31.88163
PANTHER	PTHR30008	EXODEOXYRIBONUCLEASE 7 LARGE SUBUNIT	IPR003753	Exonuclease VII, large subunit	12	450	0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.