Pseudomonas aeruginosa PAO1, PA3790 (oprC)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0006810 | transport | Inferred from Direct Assay | ECO:0000002 direct assay evidence |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:2.170.130.10 | - | IPR037066 | TonB-dependent receptor, plug domain superfamily | 74 | 187 | 3.7E-13 |
| PANTHER | PTHR30069 | TONB-DEPENDENT OUTER MEMBRANE RECEPTOR | IPR039426 | TonB-dependent receptor-like | 38 | 723 | 8.5E-89 |
| CDD | cd01347 | ligand_gated_channel | - | - | 79 | 723 | 1.17821E-111 |
| SUPERFAMILY | SSF56935 | Porins | - | - | 71 | 723 | 1.08E-94 |
| NCBIfam | TIGR01778 | JCVI: TonB-dependent copper receptor | IPR010100 | TonB-dependent copper receptor | 82 | 723 | 0.0 |
| Gene3D | G3DSA:2.40.170.20 | - | IPR036942 | TonB-dependent receptor-like, beta-barrel domain superfamily | 193 | 723 | 1.4E-69 |
| Pfam | PF07715 | TonB-dependent Receptor Plug Domain | IPR012910 | TonB-dependent receptor, plug domain | 91 | 181 | 3.2E-12 |
| Pfam | PF00593 | TonB dependent receptor | IPR000531 | TonB-dependent receptor-like, beta-barrel | 236 | 721 | 6.8E-50 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.