Pseudomonas aeruginosa PAO1, PA0008 (glyS)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0044267 cellular protein metabolic process
ISS
Inferred from Sequence or Structural Similarity
ECO:0000044
sequence similarity evidence
Biological Process GO:0006520 cellular amino acid metabolic process
ISS
Inferred from Sequence or Structural Similarity
ECO:0000044
sequence similarity evidence
Biological Process GO:0006426 glycyl-tRNA aminoacylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS50861
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004814 arginine-tRNA ligase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00836
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006420 arginyl-tRNA aminoacylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00836
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000166 nucleotide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS50861
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS50861
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004820 glycine-tRNA ligase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS50861
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS50861
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Translation, post-translational modification, degradation Other PAO1 genes in this class
Amino acid biosynthesis and metabolism Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Glycine, serine and threonine metabolism ECO:0000037
not_recorded
PseudoCyc TRNA-CHARGING-PWY tRNA charging 19.5 ECO:0000250
sequence similarity evidence used in manual assertion
12867747
PseudoCAP Aminoacyl-tRNA biosynthesis ECO:0000037
not_recorded
KEGG pae00970 Aminoacyl-tRNA biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF05746 DALR anticodon binding domain IPR008909 DALR anticodon binding 577 671 1.2E-6
SUPERFAMILY SSF109604 334 485 4.5E-17
Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. IPR015944 Glycine-tRNA ligase, beta subunit 3 683 25.421
ProSiteProfiles PS50861 Heterodimeric glycyl-transfer RNA synthetases family profile. IPR006194 Glycine-tRNA synthetase, heterodimeric 358 648 93.195
PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature IPR015944 Glycine-tRNA ligase, beta subunit 50 62 2.6E-35
SMART SM00836 IPR008909 DALR anticodon binding 580 683 0.0029
Pfam PF02092 Glycyl-tRNA synthetase beta subunit IPR015944 Glycine-tRNA ligase, beta subunit 6 545 0.0
PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature IPR015944 Glycine-tRNA ligase, beta subunit 389 408 2.6E-35
TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit IPR015944 Glycine-tRNA ligase, beta subunit 1 683 0.0
PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature IPR015944 Glycine-tRNA ligase, beta subunit 313 329 2.6E-35
PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature IPR015944 Glycine-tRNA ligase, beta subunit 241 256 2.6E-35
PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature IPR015944 Glycine-tRNA ligase, beta subunit 7 20 2.6E-35

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.