Pseudomonas aeruginosa PAO1, PA0022

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0002949 tRNA threonylcarbamoyladenosine modification
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01852
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01852
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003725 double-stranded RNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01300
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Hypothetical, unclassified, unknown Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF55821 YrdC/RibB IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily 7 184 1.46E-52
FunFam G3DSA:3.90.870.10:FF:000004 Threonylcarbamoyl-AMP synthase - - 1 183 2.3E-78
Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. IPR023535 Threonylcarbamoyl-AMP synthase 4 183 38.389717
Pfam PF01300 Telomere recombination IPR006070 Threonylcarbamoyl-AMP synthase-like domain 13 184 4.6E-43
Gene3D G3DSA:3.90.870.10 DHBP synthase - - 4 183 6.0E-55
PANTHER PTHR17490 SUA5 - - 5 184 1.4E-35

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.