Pseudomonas putida F1, Pput_0006

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0015074 DNA integration
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00665
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003676 nucleic acid binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.30.420.10
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF53098 IPR012337 Ribonuclease H-like superfamily 253 453 3.03E-20
Pfam PF00665 Integrase core domain IPR001584 Integrase, catalytic core 256 390 1.5E-14
Gene3D G3DSA:3.30.420.10 IPR036397 Ribonuclease H superfamily 252 470 1.1E-33
ProSiteProfiles PS50994 Integrase catalytic domain profile. IPR001584 Integrase, catalytic core 252 459 15.71

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.