Pseudomonas aeruginosa UCBPP-PA14, PA14_00960 (tssJ1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Fatty acid and phospholipid metabolism Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau03070 Bacterial secretion system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR03352 JCVI: type VI secretion system lipoprotein TssJ IPR017734 Type VI secretion system, lipoprotein SciN 3 146 1.7E-49
Gene3D G3DSA:2.60.40.4150 Type VI secretion system, lipoprotein SciN IPR038706 Type VI secretion protein SciN-like superfamily 24 154 9.0E-42
PANTHER PTHR37625 OUTER MEMBRANE LIPOPROTEIN-RELATED IPR017734 Type VI secretion system, lipoprotein SciN 2 148 8.0E-48
Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 IPR017734 Type VI secretion system, lipoprotein SciN 27 143 8.0E-41

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.