Pseudomonas aeruginosa UCBPP-PA14, PA14_01010 (hsiB1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Protein secretion/export apparatus Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau02025 Biofilm formation - Pseudomonas aeruginosa 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PIRSF PIRSF028301 UCP028301 IPR008312 Type VI secretion system sheath protein TssB1 3 172 7.7E-59
PANTHER PTHR35850 CYTOPLASMIC PROTEIN-RELATED IPR008312 Type VI secretion system sheath protein TssB1 4 169 1.6E-69
NCBIfam TIGR03358 JCVI: type VI secretion system contractile sheath small subunit IPR008312 Type VI secretion system sheath protein TssB1 8 163 1.5E-55
Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 IPR008312 Type VI secretion system sheath protein TssB1 12 162 2.1E-57

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.