Pseudomonas aeruginosa UCBPP-PA14, PA14_01020 (hsiC1)

Cytoplasmic Membrane
Outer Membrane
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Protein secretion/export apparatus Other UCBPP-PA14 genes in this class


Database Xref Pathway Version Evidence PMID
KEGG pau02025 Biofilm formation - Pseudomonas aeruginosa 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF05943 EvpB/VC_A0108, tail sheath N-terminal domain IPR044031 TssC1, N-terminal 69 371 0.0
NCBIfam TIGR03355 JCVI: type VI secretion system contractile sheath large subunit IPR010269 Type VI secretion system TssC-like 19 493 0.0
Pfam PF18945 EvpB/VC_A0108, tail sheath gpW/gp25-like domain IPR044032 TssC1, C-terminal 381 492 2.9E-43
PANTHER PTHR35565 CYTOPLASMIC PROTEIN-RELATED IPR010269 Type VI secretion system TssC-like 6 497 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.