Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003677 | DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02424
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0045893 | positive regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02424
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0019619 | 3,4-dihydroxybenzoate catabolic process |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02424
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | IPR036390 | Winged helix DNA-binding domain superfamily | 2 | 86 | 1.14E-12 |
Pfam | PF03466 | LysR substrate binding domain | IPR005119 | LysR, substrate-binding | 65 | 271 | 1.7E-32 |
SUPERFAMILY | SSF53850 | Periplasmic binding protein-like II | - | - | 67 | 274 | 1.81E-32 |
PANTHER | PTHR30419 | HTH-TYPE TRANSCRIPTIONAL REGULATOR YBHD | - | - | 2 | 273 | 1.9E-46 |
Gene3D | G3DSA:1.10.10.10 | - | IPR036388 | Winged helix-like DNA-binding domain superfamily | 1 | 65 | 2.5E-13 |
Gene3D | G3DSA:3.40.190.10 | - | - | - | 67 | 255 | 7.3E-27 |
Pfam | PF00126 | Bacterial regulatory helix-turn-helix protein, lysR family | IPR000847 | Transcription regulator HTH, LysR | 2 | 37 | 4.0E-11 |
Gene3D | G3DSA:3.40.190.10 | - | - | - | 141 | 245 | 7.3E-27 |
NCBIfam | TIGR02424 | JCVI: pca operon transcription factor PcaQ | IPR012787 | Pca transcription factor PcaQ | 2 | 272 | 6.9E-100 |