Pseudomonas aeruginosa UCBPP-PA14, PA14_49200 (oprH)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0001530 lipopolysaccharide binding
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA1178
ECO:0000249
sequence similarity evidence used in automatic assertion
21865172
Cellular Component GO:0009279 cell outer membrane
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA1178
ECO:0000249
sequence similarity evidence used in automatic assertion
2498288
Cellular Component GO:0016021 integral component of membrane
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA1178
ECO:0000249
sequence similarity evidence used in automatic assertion
2498288

Functional Classifications Manually Assigned by PseudoCAP

Adaptation, Protection Other UCBPP-PA14 genes in this class
Transport of small molecules Other UCBPP-PA14 genes in this class
Membrane proteins Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:2.40.160.20 - - - 23 200 1.6E-61
SUPERFAMILY SSF56925 OMPA-like IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel 45 200 1.86E-18
FunFam G3DSA:2.40.160.20:FF:000004 Outer membrane protein H1 - - 23 200 4.3E-110

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.