Pseudomonas aeruginosa LESB58, PALES_00001 (dnaA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0043565 sequence-specific DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd06571
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00377
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006275 regulation of DNA replication
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00377
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006270 DNA replication initiation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00377
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003688 DNA replication origin binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00377
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00377
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

DNA replication, recombination, modification and repair Other LESB58 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:3.40.50.300:FF:000103 Chromosomal replication initiator protein DnaA - - 177 344 4.8E-100
Gene3D G3DSA:1.10.8.60 - - - 345 415 6.2E-27
PANTHER PTHR30050 CHROMOSOMAL REPLICATION INITIATOR PROTEIN DNAA - - 1 504 0.0
CDD cd06571 Bac_DnaA_C IPR013159 Chromosomal replication initiator, DnaA C-terminal 423 512 6.34824E-42
SUPERFAMILY SSF48295 TrpR-like IPR010921 Trp repressor/replication initiator 410 512 6.28E-37
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 211 420 2.3E-7
PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature IPR020591 Chromosomal replication control, initiator DnaA-like 472 491 1.8E-52
Pfam PF00308 Bacterial dnaA protein IPR013317 Chromosomal replication initiator protein DnaA 179 396 1.0E-99
CDD cd00009 AAA - - 212 337 6.18022E-18
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 178 344 1.2E-49
PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature IPR020591 Chromosomal replication control, initiator DnaA-like 244 258 1.8E-52
FunFam G3DSA:1.10.8.60:FF:000003 Chromosomal replication initiator protein DnaA - - 345 415 2.4E-33
PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature IPR020591 Chromosomal replication control, initiator DnaA-like 310 337 1.8E-52
Pfam PF08299 Bacterial dnaA protein helix-turn-helix IPR013159 Chromosomal replication initiator, DnaA C-terminal 423 491 1.8E-31
Gene3D G3DSA:3.30.300.180 - IPR038454 DnaA, N-terminal domain superfamily 2 102 1.3E-26
Gene3D G3DSA:1.10.1750.10 - IPR010921 Trp repressor/replication initiator 421 514 4.0E-34
PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature IPR020591 Chromosomal replication control, initiator DnaA-like 276 290 1.8E-52
NCBIfam TIGR00362 JCVI: chromosomal replication initiator protein DnaA IPR001957 Chromosomal replication control, initiator DnaA 6 512 0.0
PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature IPR020591 Chromosomal replication control, initiator DnaA-like 212 232 1.8E-52
FunFam G3DSA:1.10.1750.10:FF:000001 Chromosomal replication initiator protein DnaA - - 421 514 1.4E-54
FunFam G3DSA:3.30.300.180:FF:000001 Chromosomal replication initiator protein DnaA - - 2 109 7.0E-41
SMART SM00760 bac_dnaa_c7seqb IPR013159 Chromosomal replication initiator, DnaA C-terminal 422 491 9.1E-44
Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. IPR001957 Chromosomal replication control, initiator DnaA 3 513 34.157234
Pfam PF11638 DnaA N-terminal domain IPR024633 DnaA N-terminal domain 4 63 2.7E-20
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 180 390 2.21E-44

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.