Pseudomonas aeruginosa PAO1, PA0279

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA0279
Name
Synonym: ydfF
Replicon chromosome
Genomic location 313227 - 313925 (+ strand)
Transposon Mutants 3 transposon mutants in PAO1

Cross-References

RefSeq NP_248970.1
GI 15595476
Affymetrix PA0279_at
Entrez 883024
GenBank AAG03668.1
INSDC AAG03668.1
NCBI Locus Tag PA0279
protein_id(GenBank) gb|AAG03668.1|AE004466_2|gnl|PseudoCAP|PA0279
TIGR NTL03PA00280
UniParc UPI00000C4FDB
UniProtKB Acc Q9I6L1
UniProtKB ID Q9I6L1_PSEAE
UniRef100 UniRef100_A0A077JKC3
UniRef50 UniRef50_W6R8J5
UniRef90 UniRef90_A6UY80

Product

Feature Type CDS
Coding Frame 1
Product Name
probable transcriptional regulator
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Charge (pH 7) 7.84
Kyte-Doolittle Hydrophobicity Value -0.130
Molecular Weight (kDa) 24.4
Isoelectric Point (pI) 10.38

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 126 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000276 (481 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA0279

Human Homologs

References

No references are associated with this feature.